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Objective: To investigate whether cerebral hyperintensities on T 2 -weighted magnetic resonance images (MRI) are associated with childhood neuropsychiatric disorders. Method: The authors compared the frequency of cortical and subcortical cerebral hyperintensities in 100 children and adolescents with Tourette’s syndrome, obsessive-compulsive disorder (OCD), or attention deficit hyperactivity disorder (ADHD) and 32 healthy comparison subjects. Results: The frequency of cerebral hyperintensities was significantly higher in subjects with Tourette’s syndrome, OCD, or ADHD than in healthy comparison subjects; each diagnostic group seemed to contribute to this effect. Among the patient groups, the likelihood of detecting cerebral hyperintensities in the subcortex (primarily the basal ganglia and thalamus) was significantly greater than in the cortex. Conclusions: A childhood diagnosis of Tourette’s syndrome, OCD, or ADHD significantly increased the likelihood of detecting cerebral hyperintensities, particularly in the subcortex, supporting the notion that subcortical injury may play a role in the pathophysiology of these conditions.